Breadcrumb

Project
Incidence of inbreeding and inbreeding depression in Southern Resident Killer Whales

Dataset
Killer Whale Genetic Data

Dataset Description
Microsatellite, SNP, and mtDNA sequence data from southern resident killer whales

Data contact
Mike Ford

InPort Dataset Reference
View complete data set metadata: 18597

Table
Combined Snp And Usat Genotypes Feb 10 2017

Table description
Table of multi-locus microsatellite and single nucleotide polymorphism (SNP) genotypes collected from southern resident killer whales.

InPort Entity Reference
View complete entity metadata: 51478

Web Service End Point
https://www.webapps.nwfsc.noaa.gov/apex/parr/combined_snp_and_usat_genotypes_feb_10_2017/data/page/

Metadata Service End Point
https://www.webapps.nwfsc.noaa.gov/apex/parr/combined_snp_and_usat_genotypes_feb_10_2017/metadata/all/

Source URL
https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/combined_snp_and_usat_genotypes_feb_10_2017

Preferred Citation
Ford, Mike; 02/05/2018. NOAA Fisheries Northwest Fisheries Science Center. Killer Whale Genetic Data: Combined Snp And Usat Genotypes Feb 10 2017 (https://www.webapps.nwfsc.noaa.gov/apex/parrdata/inventory/tables/table/combined_snp_and_usat_genotypes_feb_10_2017)

Id (TEXT)
individual identifier. Name of the sample being genotyped.

Oor 100079 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 100079 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 100362 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 100362 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 100846 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 100846 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 101161 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 101161 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 101241 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 101241 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 101641 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 101641 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 101907 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 101907 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 102202 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 102202 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 102845 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 102845 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 102860 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 102860 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 103349 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 103349 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 103887 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 103887 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 104044 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 104044 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 104340 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 104340 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 104435 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 104435 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 104683 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 104683 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 105103 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 105103 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 105415 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 105415 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 105982 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 105982 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 106047 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 106047 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 106351 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 106351 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 107128 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 107128 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 10805 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 10805 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 112291 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 112291 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 11720 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 11720 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 118653 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 118653 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 118863 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 118863 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 120591 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 120591 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 120695 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 120695 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 122338 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 122338 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 12912 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 12912 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 17294 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 17294 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 18685 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 18685 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 21511 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 21511 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 30411 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 30411 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 34367 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 34367 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 61181 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 61181 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 64449 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 64449 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 70745 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 70745 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 75702 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 75702 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 80465 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 80465 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 84520 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 84520 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 8689 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 8689 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 87542 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 87542 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 87788 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 87788 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 87797 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 87797 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 93425 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 93425 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 940 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 940 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 94302 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 94302 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 94764 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 94764 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 94779 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 94779 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 95192 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 95192 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 9585 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 9585 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 96837 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 96837 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 96900 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 96900 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 97588 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 97588 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 97719 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 97719 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 98002 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 98002 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 98234 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 98234 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor 99690 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor 99690 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor Actc 676 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor Actc 676 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor Ahcy 698 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor Ahcy 698 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor Drd2 187 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor Drd2 187 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor Fes 818 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor Fes 818 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor Fibrinogen 187 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor Fibrinogen 187 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor Lf 790 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor Lf 790 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor Nppa 323 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor Nppa 323 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Oor Wt1 540 1 1 (NUMBER)
First allele at a diploid SNP genotype. Allele 1 at a SNP locus.

Oor Wt1 540 1 2 (NUMBER)
Second allele at a diploid SNP genotype. Allele 2 at a SNP locus.

Eva37a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Eva37b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Gt39a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Gt39b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Ttr04a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Ttr04b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Ttr11a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Ttr11b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Ttr48a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Ttr48b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Kw4a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Kw4b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Eva1a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Eva1b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Eva5a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Eva5b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Fcb5a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Fcb5b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Fcb11a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Fcb11b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Fcb12a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Fcb12b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Fcb17a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Fcb17b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Kwm2aa (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Kwm2ab (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Kwm12aa (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Kwm12bb (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Gt48a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Gt48b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Gt142a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Gt142b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Mk5a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Mk5b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Mk9a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Mk9b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Dde65a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Dde65b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Dde66a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Dde66b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Dde70a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Dde70b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Kw199a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Kw199b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Kw207a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Kw207b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Ba415a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Ba415b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Ba464a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Ba464b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Ttr34a (NUMBER)
First allele at a diploid microsatellite genotype. Allele 1 at a microsatellite locus.

Ttr34b (NUMBER)
Second allele at a diploid microsatellite genotype. Allele 2 at a microsatellite locus.

Record Number (TEXT)
An indication of the total number of records in the data. Added to help indicate how much data should be expected when accessing or downloading, so end users know if they got all the data.

Accessed Date (TEXT)
The date on which this data was accessed or downloaded. Added when data is delivered to record when the data was downloaded.

Source Url (TEXT)
The human interface access point for this data table.

Preferred Citation (TEXT)
The preferred citation for this data table.

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